pemsley

Creates interactive inline graphs from Coot data, enabling visualization of per-residue metrics directly in chat.

Facilitates molecular manipulation and visualization using RDKit within Coot's Python environment for cheminformatics tasks.

Provides best practices for protein structure refinement and validation in Coot, enhancing accuracy and workflow efficiency.

Provides best practices for using Coot's Python API, ensuring optimal performance and correct usage in coding tasks.

Guides users on handling unmodeled density blobs in molecular modeling, enhancing chain extension and residue addition techniques.

Facilitates density-fit correlation analysis in Coot for molecular model validation and refinement.

Provides essential API functions for Coot, enabling efficient model validation and management in molecular workflows.

Guides users in creating high-quality molecular graphics figures in Coot with custom colors and representations.

Provides best practices for model-building and refinement using Coot, enhancing accuracy in molecular modeling workflows.

Enables querying the PDBe API from Coot for accessing protein structure metadata and validation data efficiently.

Facilitates comprehensive structure validation in Coot, analyzing model-to-map fit and detecting unmodeled density for improved accuracy.

Provides guidance on using NCS-related molecules for building fragments in molecular modeling, enhancing accuracy and efficiency.

Guides developers on effective debugging practices, emphasizing root cause analysis over workarounds.