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clinical-variant-reporter

Classifies germline variants using ACMG/AMP guidelines, generating clinical-grade reports with evidence audit trails.

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The clinical-variant-reporter skill was audited on Jun 11, 2026 and we found 8 security issues across 1 threat category. Review the findings below before installing.

Categories Tested

Security Issues

low line 227

External URL reference

SourceSKILL.md
227- [Richards et al. (2015)](https://pubmed.ncbi.nlm.nih.gov/25741868/) — ACMG/AMP standards and guidelines for the interpretation of sequence variants. *Genet Med* 17:405–424
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External URL reference

SourceSKILL.md
228- [Rehm et al. (2013)](https://pubmed.ncbi.nlm.nih.gov/23887774/) — ACMG clinical laboratory standards for next-generation sequencing. *Genet Med* 15:733–747
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External URL reference

SourceSKILL.md
229- [Miller et al. (2023)](https://pmc.ncbi.nlm.nih.gov/articles/PMC10524344/) — ACMG SF v3.2 list for reporting of secondary findings. *Genet Med* 25:100866
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External URL reference

SourceSKILL.md
230- [Abou Tayoun et al. (2018)](https://pubmed.ncbi.nlm.nih.gov/30192042/) — PVS1 ACMG/AMP variant criterion recommendations. *Human Mutation* 39:1517–1524
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External URL reference

SourceSKILL.md
231- [Li & Wang (2017)](https://pubmed.ncbi.nlm.nih.gov/28132688/) — InterVar: clinical interpretation of genetic variants. *Am J Hum Genet* 100:267–280
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External URL reference

SourceSKILL.md
232- [ClinVar](https://www.ncbi.nlm.nih.gov/clinvar/) — NCBI clinical significance database
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External URL reference

SourceSKILL.md
233- [gnomAD](https://gnomad.broadinstitute.org/) — Genome Aggregation Database
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External URL reference

SourceSKILL.md
234- [ClinGen](https://clinicalgenome.org/) — Clinical Genome Resource
Scanned on Jun 11, 2026
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