bioqc-mcp
Automates sequencing quality control and visualization using FastQC and MultiQC, generating detailed reports and interactive charts.
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Security score
The bioqc-mcp skill was audited on Jun 6, 2026 and we found 2 security issues across 2 threat categories, including 1 high-severity. Review the findings below before installing.
Categories Tested
Security Issues
high line 189
Python subprocess execution
SourceSKILL.md
| 189 | - **No code execution**: All analysis is performed via explicit `subprocess.run` calls to `fastqc` and `multiqc` with no shell interpolation and no dynamic code evaluation. |
low line 208
External URL reference
SourceSKILL.md
| 208 | - Andrews S. FastQC: A Quality Control Tool for High Throughput Sequence Data (2010). http://www.bioinformatics.babraham.ac.uk/projects/fastqc |
Scanned on Jun 6, 2026
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Categorydata analytics
UpdatedJune 13, 2026
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