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bio-genome-intervals-bigwig-tracks

Create and read bigWig browser tracks for visualizing continuous genomic data. Convert bedGraph to bigWig, extract signal values, and generate coverage tracks using UCSC tools and pyBigWig. Use when preparing coverage tracks for genome browsers or extracting signal at specific regions.

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Security score

The bio-genome-intervals-bigwig-tracks skill was audited on May 13, 2026 and we found 4 security issues across 2 threat categories. Review the findings below before installing.

Categories Tested

Security Issues

medium line 43

Wget to non-GitHub URL

SourceSKILL.md
43wget http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bedGraphToBigWig
medium line 68

Wget to non-GitHub URL

SourceSKILL.md
68wget https://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/hg38.chrom.sizes
low line 43

External URL reference

SourceSKILL.md
43wget http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bedGraphToBigWig
low line 68

External URL reference

SourceSKILL.md
68wget https://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/hg38.chrom.sizes
Scanned on May 13, 2026
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Categorydevelopment
UpdatedMay 13, 2026
GPTomics/bioSkills