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bio-longread-medaka

Polish assemblies and call variants from Oxford Nanopore data using medaka. Uses neural networks trained on specific basecaller versions. Use when improving ONT-only assemblies or calling variants from Nanopore data without short-read polishing.

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bio-longread-medaka4 files

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Categorydevelopment
UpdatedMay 13, 2026
GPTomics/bioSkills