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comprehensive-variant-annotation

Queries multiple genomics databases for comprehensive variant annotation using rsID, providing detailed insights into genetic variants.

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Security score

The comprehensive-variant-annotation skill was audited on Mar 1, 2026 and we found 12 security issues across 1 threat category. Review the findings below before installing.

Categories Tested

Security Issues

low line 21

External URL reference

SourceSKILL.md
21API: GET https://api.ncbi.nlm.nih.gov/variation/v0/refsnp/{rsid_number}
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External URL reference

SourceSKILL.md
33API: GET https://api.genohub.org/v1/rsids/{rsid}
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External URL reference

SourceSKILL.md
43API: POST https://gnomad.broadinstitute.org/api
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External URL reference

SourceSKILL.md
53API: GET https://www.ebi.ac.uk/gwas/rest/api/associations/search/findByRsId?rsId={rsid}
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External URL reference

SourceSKILL.md
71API: GET https://api.clinpgx.org/v1/data/clinicalAnnotation?location.fingerprint={rsid}&view=base
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SourceSKILL.md
80API: GET https://reg.genome.network/alleles?dbSNP.rs={rs_id}
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SourceSKILL.md
113dbsnp_url = f"https://api.ncbi.nlm.nih.gov/variation/v0/refsnp/{rsid_num}"
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SourceSKILL.md
134favor_url = f"https://api.genohub.org/v1/rsids/{rs_id}"
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SourceSKILL.md
169"https://gnomad.broadinstitute.org/api",
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SourceSKILL.md
181gwas_url = f"https://www.ebi.ac.uk/gwas/rest/api/associations/search/findByRsId?rsId={rs_id}"
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SourceSKILL.md
193pgx_url = f"https://api.clinpgx.org/v1/data/clinicalAnnotation?location.fingerprint={rs_id}&view=base"
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External URL reference

SourceSKILL.md
202clingen_url = f"https://reg.genome.network/alleles?dbSNP.rs={rs_id}"
Scanned on Mar 1, 2026
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