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rcsb-pdb-skill

Facilitates compact RCSB PDB requests for metadata, search queries, and FASTA downloads, enhancing data retrieval efficiency.

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Security score

The rcsb-pdb-skill skill was audited on May 24, 2026 and we found 5 security issues across 1 threat category. Review the findings below before installing.

Categories Tested

Security Issues

low line 8

External URL reference

SourceSKILL.md
8- Use `base_url=https://data.rcsb.org/rest/v1` for core metadata, `https://search.rcsb.org/rcsbsearch/v2` for Search API, and `https://www.rcsb.org` for FASTA downloads.
low line 23

External URL reference

SourceSKILL.md
23- `{"base_url":"https://data.rcsb.org/rest/v1","path":"core/entry/4hhb"}`
low line 24

External URL reference

SourceSKILL.md
24- `{"base_url":"https://search.rcsb.org/rcsbsearch/v2","path":"query","method":"POST","json_body":{"query":{"type":"terminal","service":"full_text","parameters":{"value":"hemoglobin"}},"return_type":"
low line 25

External URL reference

SourceSKILL.md
25- `{"base_url":"https://www.rcsb.org","path":"fasta/entry/4HHB/download","response_format":"text"}`
low line 34

External URL reference

SourceSKILL.md
34echo '{"base_url":"https://data.rcsb.org/rest/v1","path":"core/entry/4hhb"}' | python scripts/rest_request.py
Scanned on May 24, 2026
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GitHub Stars 1.2K
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Categorydata analytics
UpdatedJune 10, 2026
openai/plugins