bio-metagenomics-strain-tracking
Track bacterial strains using MASH, sourmash, fastANI, and inStrain. Compare genomes, detect contamination, and monitor strain-level variation. Use when needing sub-species resolution for outbreak tracking, transmission analysis, or within-host strain dynamics.
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The bio-metagenomics-strain-tracking skill was audited on May 13, 2026 and we found 2 security issues across 1 threat category. Review the findings below before installing.
Categories Tested
Security Issues
medium line 187
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SourceSKILL.md
| 187 | ```bash |
medium line 216
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SourceSKILL.md
| 216 | ```bash |
Scanned on May 13, 2026
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