uniprot-database
Provides direct REST API access to UniProt for protein searches, FASTA retrieval, and ID mapping, enhancing bioinformatics workflows.
Install this skill
or
87/100
Security score
The uniprot-database skill was audited on May 14, 2026 and we found 13 security issues across 1 threat category. Review the findings below before installing.
Categories Tested
Security Issues
low line 56
External URL reference
SourceSKILL.md
| 56 | Use the API search endpoint: `https://rest.uniprot.org/uniprotkb/search?query={query}&format={format}` |
low line 68
External URL reference
SourceSKILL.md
| 68 | **Retrieve endpoint:** `https://rest.uniprot.org/uniprotkb/{accession}.{format}` |
low line 70
External URL reference
SourceSKILL.md
| 70 | Example: `https://rest.uniprot.org/uniprotkb/P12345.fasta` |
low line 77
External URL reference
SourceSKILL.md
| 77 | 1. Submit mapping job to: `https://rest.uniprot.org/idmapping/run` |
low line 78
External URL reference
SourceSKILL.md
| 78 | 2. Check job status: `https://rest.uniprot.org/idmapping/status/{jobId}` |
low line 79
External URL reference
SourceSKILL.md
| 79 | 3. Retrieve results: `https://rest.uniprot.org/idmapping/results/{jobId}` |
low line 97
External URL reference
SourceSKILL.md
| 97 | `https://rest.uniprot.org/uniprotkb/stream?query={query}&format={format}` |
low line 117
External URL reference
SourceSKILL.md
| 117 | **Example:** `https://rest.uniprot.org/uniprotkb/search?query=insulin&fields=accession,gene_names,organism_name,length,sequence&format=tsv` |
low line 190
External URL reference
SourceSKILL.md
| 190 | - **API Documentation**: https://www.uniprot.org/help/api |
low line 191
External URL reference
SourceSKILL.md
| 191 | - **Interactive API Explorer**: https://www.uniprot.org/api-documentation |
low line 192
External URL reference
SourceSKILL.md
| 192 | - **REST Tutorial**: https://www.uniprot.org/help/uniprot_rest_tutorial |
low line 193
External URL reference
SourceSKILL.md
| 193 | - **Query Syntax Help**: https://www.uniprot.org/help/query-fields |
low line 194
External URL reference
SourceSKILL.md
| 194 | - **SPARQL Endpoint**: https://sparql.uniprot.org/ (for advanced graph queries) |
Scanned on May 14, 2026
View Security DashboardGitHub Stars 39.2K
Rate this skill
Categoryeducation research
UpdatedJune 10, 2026
sickn33/antigravity-awesome-skills